We are excited to introduce LocalSynteny, a new feature in PGDD 2.0 that makes exploring gene collinearity across plant genomes more intuitive, flexible, and in…

PhyloWGD provides a phylogeny-aware view of whole-genome duplication (WGD) events across angiosperms, enabling users to explore duplication histories in an evol…

The new pipeline experience introduces a streamlined, guided MCScanX workflow presented as a six-step wizard. Users can optionally upload genomes by providing a…

The Multi-Synteny Viewer is an interactive visualization tool designed for exploring syntenic relationships across multiple genomes simultaneously. It enables r…

The Three-Way Synteny Viewer is an interactive 3D visualization tool for simultaneously comparing syntenic relationships across three plant species, identifying…

PGDD 2.0 now features a fully integrated MCScanX Web module, enabling users to perform in-browser collinearity and duplication analysis directly within the PGDD…

24 Sept 2025: PGDD v2.0 is now live with 218 genomes. Explore updates in Locus Search, Dot Plot, Riparian Plot, and Downloads.…