Ziziphus jujuba
Zju Zingiberaceae Zingiberales

Ziziphus jujuba

24 2n Chromosomes
Zingiberaceae Family
Taxonomic Classification
Kingdom Plantae Phylum Magnoliophyta Class Magnoliopsida Order Zingiberales Family Zingiberaceae
Genome & Ploidy
2n
24 chromosomes
Polyploidy History (PhyloWGD)
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Species Notes
Description
Jujube, sometimes jujuba, scientific name Ziziphus jujuba, and also called red date, Chinese date, and Chinese jujube, is a species in the genus Ziziphus in the buckthorn family Rhamnaceae. It is often confused with the closely related Indian jujube, Z. mauritiana. The Chinese jujube enjoys a diverse range of climates from temperate to tropical, whereas the Indian jujube is restricted to warmer subtropical and tropical climates.
Data source
build_pgdd_species_jsons.py
Wikipedia
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Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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