Vaccinium vitis-idaea
Vvit Ericaceae Ericales

Vaccinium vitis-idaea

Ericaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Ericales Family Ericaceae
Darwin Tree of Life · GCA_963854785.1
Polyploidy History (PhyloWGD)
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Species Notes
Description
Vaccinium vitis-idaea is a small evergreen shrub in the heath family, Ericaceae. It is known colloquially as the lingonberry, partridgeberry, foxberry, mountain cranberry, or cowberry. It is native to boreal forest and Arctic tundra throughout the Northern Hemisphere.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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