Vicia sativa
Vsat Fabaceae Fabales

Vicia sativa

1749 Mb Genome Size
6 Chromosomes
Chromosome Assembly Level
346.6 Mb N50
Fabaceae Family
2024 Release Year
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Fabales Family Fabaceae
Darwin Tree of Life · drVicSati1.hap1.1 · GCA_964197575.1 · 2024-07-03
Polyploidy History (PhyloWGD)
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Species Notes
Description
Vicia sativa, known as the common vetch, garden vetch, tare or simply vetch, is a nitrogen-fixing leguminous plant in the family Fabaceae. It is now naturalised throughout the world occurring on every continent, except Antarctica and the Arctic. The centre of diversity is thought to be the Fertile Crescent, although gold standard molecular confirmation is currently not available.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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