Vitis riparia
Vrip Vitaceae Vitales

Vitis riparia

Vitaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Vitales Family Vitaceae
Polyploidy History (PhyloWGD)
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Species Notes
Description
Vitis riparia Michx, with common names riverbank grape or frost grape, is a vine indigenous to North America. As a climbing or trailing vine, it is widely distributed across central and eastern Canada and the central and northeastern parts of the United States, from Quebec to Texas, and eastern Montana to Nova Scotia. There are reports of isolated populations in the northwestern USA, but these are probably naturalized.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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