Vanilla planifolia
Vanpl Orchidaceae

Vanilla planifolia

Orchidaceae Family
Taxonomic Classification
Kingdom Plantae Family Orchidaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Vanilla planifolia is a species of vanilla orchid native to Mexico, Central America, Colombia, and Brazil. It is one of the primary sources for vanilla flavouring, due to its high vanillin content. Common names include flat-leaved vanilla and West Indian vanilla, though it is often simply referred to as vanilla.
Data source
sync_pangenome_to_db.py
Wikipedia
View article
Image credit
© Wikimedia Commons — Vanilla planifolia
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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