Wall Pennywort
Urup Crassulaceae Saxifragales

Wall Pennywort

352 Mb Genome Size
25 Chromosomes
Chromosome Assembly Level
15.4 Mb N50
Crassulaceae Family
2023 Release Year
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Saxifragales Family Crassulaceae
Darwin Tree of Life · drUmbRupe1.1 · GCA_963678935.1 · 2023-12-06
Polyploidy History (PhyloWGD)
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Species Notes
Description
Wall pennywort, also called navelwort, or penny-pies, is a fleshy, perennial, edible flowering plant in the stonecrop family Crassulaceae in the genus Umbilicus so named for its umbilicate (navel-like) leaves.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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