Trifolium subterraneum
Tsub2 Fabaceae Fabales

Trifolium subterraneum

484 Mb Genome Size
8 Chromosomes
Chromosome Assembly Level
59.0 Mb N50
Fabaceae Family
2023 Release Year
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Fabales Family Fabaceae
Darwin Tree of Life · drTriSubt1.1 · GCA_951799995.1 · 2023-05-27
Polyploidy History (PhyloWGD)
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Species Notes
Description
Trifolium subterraneum, the subterranean clover, subterranean trefoil, is a species of clover native to Europe, Southwest Asia, Northwest Africa and Macaronesia. The plant's name comes from its underground seed development (geocarpy), a characteristic not possessed by other clovers.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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