Trichopus zeylanicus
Trize Dioscoreaceae

Trichopus zeylanicus

Dioscoreaceae Family
Taxonomic Classification
Kingdom Plantae Family Dioscoreaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Trichopus zeylanicus is a small herbaceous plant, which is one of only two species of its genus, Trichopus. Formerly it was placed in its own family, Trichopodaceae, but is now included in the family Dioscoreaceae. The leaves are about 20 centimetres (7.9 in) long and grow from a rhizome.
Data source
sync_pangenome_to_db.py
Wikipedia
View article
Image credit
© Wikimedia Commons — Trichopus zeylanicus
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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