Trapa incisa
Train Lythraceae

Trapa incisa

Lythraceae Family
Taxonomic Classification
Kingdom Plantae Family Lythraceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Trapa incisa, the tiny water-chestnut, is a widespread species of flowering plant in the family Lythraceae. It is native to subtropical areas of northeastern India, Southeast Asia, eastern China, Korea, Japan, and the Russian Far East. A hydrosubshrub, it is typically found in freshwater ponds and swamps from sea level to 2,000 m (6,600 ft).
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Trapa incisa
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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