Tragopogon pratensis
Tpra2 Asteraceae Asterales

Tragopogon pratensis

2070 Mb Genome Size
6 Chromosomes
Chromosome Assembly Level
383.4 Mb N50
Asteraceae Family
2024 Release Year
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Asterales Family Asteraceae
Darwin Tree of Life · daTraPrat1.hap1.1 · GCA_964059535.1 · 2024-06-06
Polyploidy History (PhyloWGD)
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Species Notes
Description
Tragopogon pratensis is a biennial plant in the family Asteraceae. It flowers between June and October.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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