Tamarix chinensis
Tach Tamaricaceae Caryophyllales

Tamarix chinensis

Tamaricaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Caryophyllales Family Tamaricaceae
TreeGenes · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Tamarix chinensis is a species of flowering plant in the family Tamaricaceae. It is sometimes referred to by the common names five-stamen tamarisk and Chinese tamarisk or saltcedar. It is native to China and Korea, and it is known in many other parts of the world as an introduced species and sometimes an invasive noxious weed.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Tamarix chinensis
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
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Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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