Strobilanthes cusia
Strcu Acanthaceae

Strobilanthes cusia

Acanthaceae Family
Taxonomic Classification
Kingdom Plantae Family Acanthaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Strobilanthes cusia, also known as Assam indigo or Chinese rain bell, is a perennial flowering plant of the family Acanthaceae. Native to South Asia, China, and Indochina, it was historically cultivated on a large scale in India and China as a source of indigo dye, which is also known as Assam indigo. In addition to being used for dye, it is also used in the traditional Chinese herbal medicine "Qingdai".
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Strobilanthes cusia
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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