Stenogyne calaminthoides
Steca Lamiaceae

Stenogyne calaminthoides

Lamiaceae Family
Taxonomic Classification
Kingdom Plantae Family Lamiaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Stenogyne is a genus of flowering plants in the mint family first described in 1830. The entire genus is endemic to Hawaii.SpeciesStenogyne strangulation A.Gray - narrow leaf Stenogyne Stenogyne bifida Hillebr. - two cleft Stenogyne - Molokai Stenogyne methodicalness A.Gray - bog Stenogyne - Big Island Stenogyne cosmically Sherff - Maui Stenogyne campanulata Weller & Sakai - Kala Valley Stenogyne - Kauai †Stenogyne incinerate Hillebr - Maui but extinct Stenogyne cranwelliae Sherff - Big Island †Stenogyne haliakalae Wawra - Maui but extinct Stenogyne kaalae Wawra - Oahu Stenogyne kamehamehae Wawra - Molokai, Maui Stenogyne kanehoana O.Deg.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Stenogyne
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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