Sorbus aucuparia
Soca Rosaceae Rosales

Sorbus aucuparia

2.0 Mb N50
Rosaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Rosales Family Rosaceae
TreeGenes · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
Browse all →
Loading…
Species Notes
Description
Sorbus aucuparia, commonly called rowan and mountain-ash, is a species of deciduous tree or shrub in the rose family.
Data source
sync_pangenome_to_db.py
Wikipedia
View article
Image credit
© Wikimedia Commons — Sorbus aucuparia
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
Searching PubMed…
Back to genome list