Slae Dipterocarpaceae Malvales

Shorea laevis

Shorea laevis

Dipterocarpaceae Family

Taxonomic Classification

Polyploidy History (PhyloWGD)

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Annotation Quality (OMarK)

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Species Notes

Common name(s): Shorea laevis
Description: Shorea laevis is a species of tree in the family Dipterocarpaceae. It is native to Myanmar, Thailand, Sumatra, Peninsular Malaysia and Borneo. It is considered Vulnerable due to deforestation for agriculture and being logged for its timber.

Downloads

Protein sequences

FASTA (.pep) — amino acid sequences for all annotated genes

Gene coordinates

BED format — chromosomal positions for MCScanX input

Coding sequences

FASTA (.cds) — nucleotide CDS for Ka/Ks analysis

Gene type annotations

TSV — gene duplication classifications

Grayed items are not yet available in local archive.

Analysis Tools

Synteny & Collinearity

MCScanX Dotplot Synteny Network SynVisio

Evolutionary Analysis

Sequence Search

BLAST Locus Search

External Databases

Ensembl Plants NCBI UniProt Taxonomy GBIF USDA PLANTS

Dipterocarpaceae-specific

Phytozome (JGI)

Related Literature (genome, WGD & evolution)

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