Schoenoplectus lacustris
Slac Cyperaceae Poales

Schoenoplectus lacustris

481 Mb Genome Size
20 Chromosomes
Chromosome Assembly Level
23.9 Mb N50
Cyperaceae Family
2024 Release Year
Taxonomic Classification
Kingdom Plantae Class Liliopsida Order Poales Family Cyperaceae
Darwin Tree of Life · lpSchLacu1.1 · GCA_964200675.1 · 2024-07-24
Polyploidy History (PhyloWGD)
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Species Notes
Description
Schoenoplectus lacustris, the common club-rush, is a species of club-rush that grows in fresh water across Europe, much of Asia, and with a disjunct population in southern Africa.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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