Striga hermonthica
Sher Orobanchaceae Lamiales

Striga hermonthica

Striga hermonthica

Orobanchaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Lamiales Family Orobanchaceae
Polyploidy History (PhyloWGD)
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Species Notes
Common name(s)
Striga hermonthica
Description
Striga hermonthica, commonly known as purple witchweed or giant witchweed, is a hemiparasitic plant that belongs to the family Orobanchaceae. It is devastating to major crops such as sorghum and rice. In sub-Saharan Africa, apart from sorghum and rice, it also infests maize, pearl millet, and sugar cane.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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