Sequoia sempervirens
Seqse Cupressaceae

Sequoia sempervirens

Cupressaceae Family
Taxonomic Classification
Kingdom Plantae Family Cupressaceae
PlantGIR · v2.1
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Sequoia sempervirens is the sole living species of the genus Sequoia in the cypress family Cupressaceae. Common names include coast redwood, coastal redwood and California redwood. It is an evergreen, long-lived, monoecious tree living 1,200–2,200 years or more.
Data source
sync_pangenome_to_db.py
Wikipedia
View article
Image credit
© Wikimedia Commons — Sequoia sempervirens
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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