Secale cereale
Secce Poaceae

Secale cereale

Poaceae Family
Taxonomic Classification
Kingdom Plantae Family Poaceae
PlantGIR · Lo7
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Rye is a grass grown extensively as a grain, a cover crop and a forage crop. It is grown principally in an area from Eastern and Northern Europe into Russia. It is much more tolerant of cold weather and poor soil than other cereals, making it useful in those regions; its vigorous growth suppresses weeds and provides abundant forage for animals early in the year.
Data source
sync_pangenome_to_db.py
Wikipedia
View article
Image credit
© Wikimedia Commons — Rye
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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