Striga asiatica
Sasi Orobanchaceae Lamiales

Striga asiatica

Orobanchaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Lamiales Family Orobanchaceae
Polyploidy History (PhyloWGD)
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Species Notes
Description
Striga asiatica, the Asiatic witchweed or the red witchweed, is a hemiparasitic plant in the family Orobanchaceae. It is native to Asia and sub-Saharan Africa, but has been introduced into other parts of the world including Australia and the United States. Asiatic witchweed is a serious agricultural pest, as it parasitises important crop species, including corn, rice, sorghum, and sugar cane, often causing substantial yield reductions.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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