Sherardia
Sarv Rubiaceae Gentianales

Sherardia

441 Mb Genome Size
11 Chromosomes
Chromosome Assembly Level
43.6 Mb N50
Rubiaceae Family
2023 Release Year
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Gentianales Family Rubiaceae
Darwin Tree of Life · daSheArve1.1 · GCA_948330725.1 · 2023-01-26
Polyploidy History (PhyloWGD)
Browse all →
Loading…
Species Notes
Description
Sherardia is a monotypic genus of flowering plants in the family Rubiaceae. The genus contains only one species, Sherardia arvensis, the (blue) field madder, which is widespread across most of Europe and northern Africa as well as southwest and central Asia and Macaronesia. It is also reportedly naturalized in Australia, New Zealand, Taiwan, Kerguelen, Ethiopia, Sudan, southern Africa, Mexico, Costa Rica, South America, Bermuda, Cuba, Haiti and much of Canada and the United States.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
Searching PubMed…
Back to genome list