Salvia miltiorrhiza
Salmi Lamiaceae

Salvia miltiorrhiza

Lamiaceae Family
Taxonomic Classification
Kingdom Plantae Family Lamiaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Salvia miltiorrhiza, also known as red sage, redroot sage, Chinese sage, or danshen, is a perennial plant in the family Lamiaceae, highly valued for its roots in traditional Chinese medicine. Native to China and Japan, it grows at 90 to 1,200 m elevation, preferring grassy places in forests, hillsides, and along stream banks. The specific epithet miltiorrhiza means "red ochre root".
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Salvia miltiorrhiza
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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