Rubus argutus
Rarg2 Rosaceae Rosales

Rubus argutus

Rubus argutus

Rosaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Rosales Family Rosaceae
Polyploidy History (PhyloWGD)
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Species Notes
Common name(s)
Rubus argutus
Description
Rubus argutus is a North American species of prickly bramble in the rose family. It is a perennial plant native to the eastern and south-central United States. Common names are sawtooth blackberry or tall blackberry after its high growth.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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