Quercus robur
Quro Fagaceae Fagales

Quercus robur

0.8 Mb N50
Fagaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Fagales Family Fagaceae
TreeGenes · v2
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Quercus robur, the pedunculate (or "English") oak, is a species of flowering plant in the beech and oak family, Fagaceae. It is a large tree, native to Europe and western Asia, and is widely cultivated in other temperate regions. It grows on soils of near neutral acidity in the lowlands and is notable for its value to natural ecosystems, supporting a very wide diversity of herbivorous insects and other pests, predators and pathogens.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Quercus robur
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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