Quercus acutissima
Queac Fagaceae

Quercus acutissima

Fagaceae Family
Taxonomic Classification
Kingdom Plantae Family Fagaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Quercus acutissima, the sawtooth oak, is an Asian species of oak native to China, Tibet, Korea, Japan, Taiwan, Siberia, Mongolia, Bangladesh, Philippines, Indonesia, Malaysia, India, Pakistan, Sri Lanka, Brunei, Indochina, Himalayas. It is widely planted in many lands and has become naturalized in parts of North America.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Quercus acutissima
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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