Quercus suber
Qsub Fagaceae Fagales

Quercus suber

Quercus suber

Fagaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Fagales Family Fagaceae
Polyploidy History (PhyloWGD)
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Species Notes
Common name(s)
Quercus suber
Description
Quercus suber, commonly called the cork oak, is closely related to Greek word syphar meaning 'wrinkled skin'. It is a medium-sized, evergreen oak tree in the section Quercus sect. Cerris.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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