Quercus petraea
Qpet Fagaceae Fagales

Quercus petraea

824 Mb Genome Size
12 Chromosomes
Chromosome Assembly Level
69.9 Mb N50
Fagaceae Family
2024 Release Year
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Fagales Family Fagaceae
Darwin Tree of Life · dhQuePetr1.hap1.1 · GCA_964102825.1 · 2024-06-06
Polyploidy History (PhyloWGD)
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Species Notes
Description
Quercus petraea, commonly known as the sessile oak, Welsh oak, Cornish oak, Irish oak or durmast oak, is a species of deciduous oak tree native to most of Europe and into Anatolia and Iran. The sessile oak is the national tree of Ireland, and an unofficial emblem in Wales and Cornwall.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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