Quercus cerris
Qcer Fagaceae Fagales

Quercus cerris

777 Mb Genome Size
12 Chromosomes
Chromosome Assembly Level
67.5 Mb N50
Fagaceae Family
2023 Release Year
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Fagales Family Fagaceae
Darwin Tree of Life · dhQueCerr2.1 · GCA_963669245.1 · 2023-12-09
Polyploidy History (PhyloWGD)
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Species Notes
Description
Quercus cerris, the Turkey oak or Austrian oak, is an oak native to south-eastern Europe and Asia Minor. It is the type species of Quercus sect. Cerris, a section of the genus characterised by shoot buds surrounded by soft bristles, bristle-tipped leaf lobes, and acorns that usually mature in 18 months.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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