Persicaria tinctoria
Ptin Polygonaceae Caryophyllales

Persicaria tinctoria

Polygonaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Caryophyllales Family Polygonaceae
Polyploidy History (PhyloWGD)
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Species Notes
Description
Persicaria tinctoria is a species of flowering plant in the buckwheat family. Common names include Chinese indigo, Japanese indigo and dyer's knotweed. It is native to Southern China and Vietnam, and has been introduced to other parts of China, as well as Germany, Japan, Korea, Tibet, North and South Caucasus, parts of the Russian Far-East, and Ukraine.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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