Prunus speciosa
Pspe Rosaceae Rosales

Prunus speciosa

Prunus speciosa

Rosaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Rosales Family Rosaceae
Polyploidy History (PhyloWGD)
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Species Notes
Common name(s)
Prunus speciosa
Description
Prunus speciosa, the Oshima cherry , is a true cherry tree noted for its ornamental cherry blossoms. It is native to Izu Ōshima island and the Izu Peninsula on Honshū near Tokyo, Japan.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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