Pyrus pyrifolia Hongxiangsu
Ppy Rosaceae Rosales

Pyrus pyrifolia Hongxiangsu

34 2n Chromosomes
Rosaceae Family
Taxonomic Classification
Kingdom Plantae Phylum Magnoliophyta Class Magnoliopsida Order Rosales Family Rosaceae
Genome & Ploidy
2n
34 chromosomes
Polyploidy History (PhyloWGD)
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Species Notes
Description
Pyrus pyrifolia is a species of pear tree native to southern China and northern Indochina that has been introduced to Korea, Japan and other parts of the world. The tree's edible fruit is known by many names, including Asian pear, Persian pear, Japanese pear, Chinese pear, Korean pear, Taiwanese pear, apple pear, zodiac pear, three-halves pear, papple, naspati, bata kisbis, Fefeta grained pear and sand pear. Along with cultivars of P.
Data source
build_pgdd_species_jsons.py
Wikipedia
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Image credit
© Wikimedia Commons — Pyrus pyrifolia
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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