Phtheirospermum japonicum
Pjap Orobanchaceae Lamiales

Phtheirospermum japonicum

Phtheirospermum japonicum

Orobanchaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Lamiales Family Orobanchaceae
Polyploidy History (PhyloWGD)
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Species Notes
Common name(s)
Phtheirospermum japonicum
Description
Phtheirospermum is a monotypic genus of flowering plants belonging to the family Orobanchaceae. The only species is Phtheirospermum japonicum, which is hemiparasitic and often used as a model species to study plant parasitism. P.
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Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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