Pinus lambertiana
Pila Pinaceae Pinales

Pinus lambertiana

2.9 Mb N50
Pinaceae Family
Taxonomic Classification
Kingdom Plantae Class Pinopsida Order Pinales Family Pinaceae
TreeGenes · v1.5
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Pinus lambertiana is the tallest and most massive pine tree and has among the longest cones of any conifer. It is native to coastal and inland mountain areas along the Pacific coast of North America, as far north as Oregon and as far south as Baja California in Mexico.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Pinus lambertiana
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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