Panax ginseng
Pgi Araliaceae Apiales

Panax ginseng

24 2n Chromosomes
Araliaceae Family
Taxonomic Classification
Kingdom Plantae Phylum Magnoliophyta Class Magnoliopsida Order Apiales Family Araliaceae
Genome & Ploidy
2n
24 chromosomes
Polyploidy History (PhyloWGD)
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Species Notes
Description
Panax ginseng, ginseng, also known as Asian ginseng, Chinese ginseng or Korean ginseng, is a species of plant whose root is the original source of ginseng. It is a perennial plant that grows in the mountains of East Asia. It is mainly cultivated in China, Korea, Russia, and Japan.
Data source
build_pgdd_species_jsons.py
Wikipedia
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Image credit
JoAnne Cummings · © JoAnne Cummings · CC BY-NC
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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