Plagiothecium
Pden Plagiotheciaceae Hypnales

Plagiothecium

406 Mb Genome Size
11 Chromosomes
Chromosome Assembly Level
36.4 Mb N50
Plagiotheciaceae Family
2024 Release Year
Taxonomic Classification
Kingdom Plantae Class Bryopsida Order Hypnales Family Plagiotheciaceae
Darwin Tree of Life · cbPlaDent2.1 · GCA_964237465.1 · 2024-08-31
Polyploidy History (PhyloWGD)
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Species Notes
Description
Plagiothecium is a genus of moss belonging to the family Plagiotheciaceae. It has a cosmopolitan distribution.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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