Polygonum aviculare
Pavi Polygonaceae Caryophyllales

Polygonum aviculare

352 Mb Genome Size
10 Chromosomes
Chromosome Assembly Level
33.8 Mb N50
Polygonaceae Family
2022 Release Year
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Caryophyllales Family Polygonaceae
Darwin Tree of Life · dcPolAvic1.1 · GCA_934048045.1 · 2022-03-27
Polyploidy History (PhyloWGD)
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Species Notes
Description
Polygonum aviculare or common knotgrass is a plant related to buckwheat and dock. It is also called prostrate knotweed, birdweed, pigweed and lowgrass. It is an annual found in fields and wasteland, with white flowers from June to October.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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