Persea americana Mill
Pam Lauraceae Laurales

Persea americana Mill

24 2n Chromosomes
Lauraceae Family
Taxonomic Classification
Kingdom Plantae Phylum Magnoliophyta Class Magnoliopsida Order Laurales Family Lauraceae
Genome & Ploidy
2n
24 chromosomes
Polyploidy History (PhyloWGD)
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Species Notes
Description
Persea is a genus of about 111 species of evergreen trees belonging to the laurel family, Lauraceae. The best-known member of the genus is the avocado, P. americana, widely cultivated in subtropical regions for its large, edible fruit.
Data source
build_pgdd_species_jsons.py
Wikipedia
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Image credit
{'license_short': 'CC BY-SA 4.0', 'credit_html': '<span class="int-own-work" lang="en">Own work</span>', 'artist_html': '<a href="//commons.wikimedia.org/wiki/User:Iifar" title="User:Iifar">Ivar Leidus</a>', 'usage_terms': 'Creative Commons Attribution-Share Alike 4.0', 'original_source': 'Avocado Hass - single and halved', 'image_page_url': 'https://commons.wikimedia.org/wiki/File:Avocado_Hass_-_single_and_halved.jpg'}
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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