Nicotiana sylvestris
Nsy Solanaceae Solanales

Nicotiana sylvestris

24 2n Chromosomes
Solanaceae Family
Taxonomic Classification
Kingdom Plantae Phylum Magnoliophyta Class Magnoliopsida Order Solanales Family Solanaceae
Genome & Ploidy
2n
24 chromosomes
Polyploidy History (PhyloWGD)
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Species Notes
Description
Nicotiana sylvestris is a species of flowering plant in the nightshade family Solanaceae, known by the common names woodland tobacco, flowering tobacco, and South American tobacco. It is a biennial or short-lived perennial plant in the tobacco genus Nicotiana, native to the Andes region in Argentina and Bolivia, in South America.
Data source
build_pgdd_species_jsons.py
Wikipedia
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Image credit
© Delaware State University, Claude E. Phillips Herbarium (DOV-) · CC BY-NC
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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