Magnolia sinica
Magsi Magnoliaceae

Magnolia sinica

Magnoliaceae Family
Taxonomic Classification
Kingdom Plantae Family Magnoliaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Magnolia sinica is a species of flowering plant in the family Magnoliaceae, native to southeast Yunnan Province, China. In China it is known by common name huagaimu and distributes in south subtropical monsoon broadleaved evergreen forests at altitudes between 1339 and 1707m. It is categorized as Critically Endangered on the IUCN Red List.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Magnolia sinica
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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