Logfia
Lmin Asteraceae Asterales

Logfia

545 Mb Genome Size
15 Chromosomes
Chromosome Assembly Level
36.8 Mb N50
Asteraceae Family
2024 Release Year
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Asterales Family Asteraceae
Darwin Tree of Life · daLogMini1.1 · GCA_963921325.1 · 2024-01-08
Polyploidy History (PhyloWGD)
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Species Notes
Description
Logfia is a genus of herbaceous plants in the tribe Gnaphalieae of the family Asteraceae, known as cottonrose.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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