Ligusticum chuanxiong
Ligch Apiaceae

Ligusticum chuanxiong

Apiaceae Family
Taxonomic Classification
Kingdom Plantae Family Apiaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Conioselinum anthriscoides, more commonly known as Ligusticum sinense, is a species of flowering plant in the genus hemlock-parsley. It is native to Southern China and is used in traditional Chinese medicine as two separate herbs, both derived from the rhizome and roots of the plant: gaoben (藁本) and chuanxiong (川芎). These two differ by the exact cultivar used; specifically, chuanxiong is derived from the 'Chuanxiong' cultivar only.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Conioselinum anthriscoides
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
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Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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