Liriodendron chinense
Lich Magnoliaceae Magnoliales

Liriodendron chinense

3.5 Mb N50
Magnoliaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Magnoliales Family Magnoliaceae
TreeGenes · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Liriodendron chinense is Asia's native species in the genus Liriodendron. This native of central and southern China grows in the provinces of Anhui, Guangxi, Jiangsu, Fujian, Guizhou, Hubei, Hunan, Jiangxi, Shaanxi, Zhejiang, Sichuan and Yunnan, and also locally in northern Vietnam. Protected populations occur in the Tianmushan National Reserve, Huangshan, Wuyi Shan, and Badagongshan Nature Reserve.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Liriodendron chinense
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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