Lagerstroemia indica
Lagin Lythraceae

Lagerstroemia indica

Lythraceae Family
Taxonomic Classification
Kingdom Plantae Family Lythraceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Lagerstroemia indica, commonly known as a crape myrtle, is a species of flowering plant in the genus Lagerstroemia of the family Lythraceae. It is native to East Asia, South Asia and Southeast Asia. It is an often multi-stemmed, deciduous tree with a wide spreading, flat topped, rounded, or even spike shaped open habit.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Lagerstroemia indica
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
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Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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