Jacobaea vulgaris
Jvul Asteraceae Asterales

Jacobaea vulgaris

2028 Mb Genome Size
20 Chromosomes
Chromosome Assembly Level
98.4 Mb N50
Asteraceae Family
2025 Release Year
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Asterales Family Asteraceae
Darwin Tree of Life · daJacVulg1.hap1.1 · GCA_965178225.1 · 2025-03-19
Polyploidy History (PhyloWGD)
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Species Notes
Description
Jacobaea vulgaris, synonym Senecio jacobaea, is a very common wild flower in the family Asteraceae that is native to northern Eurasia, usually in dry, open places, and has also been widely distributed as a weed elsewhere.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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