Juglans regia
Jure Juglandaceae Fagales

Juglans regia

37.1 Mb N50
Juglandaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Fagales Family Juglandaceae
TreeGenes · v2.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
Browse all →
Loading…
Species Notes
Description
Juglans regia, known by various common names including the common walnut, English walnut, or Persian walnut amongst other names, is a species of walnut. It is native to Eurasia in at least southwest and central Asia and southeast Europe, but its exact natural area is obscure due to its long history of cultivation.
Data source
sync_pangenome_to_db.py
Wikipedia
View article
Image credit
© Wikimedia Commons — Juglans regia
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
Searching PubMed…
Back to genome list