Juglans microcarpa
Jumi Juglandaceae Fagales

Juglans microcarpa

0.2 Mb N50
Juglandaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Fagales Family Juglandaceae
TreeGenes · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Juglans microcarpa, known also as the little walnut, Texas walnut, Texas black walnut or little black walnut, is a large shrub or small tree which grows wild along streams and ravines in Texas, New Mexico, Oklahoma, and Kansas, and the northernmost states of Mexico. It produces nuts with a width of 1/2—3/4 in. The pinnately compound leaves bear 7—25 untoothed to finely-toothed leaflets, each 1/4—1/2 in wide.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Juglans microcarpa
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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