Jatropha curcas
Jatcu Euphorbiaceae

Jatropha curcas

Euphorbiaceae Family
Taxonomic Classification
Kingdom Plantae Family Euphorbiaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Jatropha curcas is a species of flowering plant in the spurge family, Euphorbiaceae, that is native to the American tropics: Mexico, the Caribbean and Central and South America. It has been spread to tropical and subtropical regions around the world, becoming naturalized or invasive in many areas. The specific epithet, "curcas", was first used by Portuguese physician and naturalist Garcia de Orta more than 400 years ago.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Jatropha curcas
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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