Hordeum vulgare (barley)
Hvul Poaceae Poales

Hordeum vulgare (barley)

870 Mb Genome Size
48 Chromosomes
Chromosome Assembly Level
17.8 Mb N50
Poaceae Family
2024 Release Year
Taxonomic Classification
Kingdom Plantae Phylum Angiosperms (Monocots) Class Liliopsida Order Poales Family Poaceae
Darwin Tree of Life · drHydVulg1.hap1.1 · GCA_964106935.1 · 2024-06-06
Genome & Ploidy
2n
14 chromosomes
Polyploidy History (PhyloWGD)
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Species Notes
Description
Hordeum is a genus of annual and perennial plants in the grass family. The species are native throughout the temperate regions of Africa, Eurasia, and the Americas.
Data source
build_pgdd_species_jsons.py
Wikipedia
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Image credit
{'license_short': 'Public domain', 'credit_html': None, 'artist_html': None, 'usage_terms': 'Public domain', 'original_source': 'Barley', 'image_page_url': 'https://commons.wikimedia.org/wiki/File:Barley.jpg'}
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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