Hibiscus cannabinus
Hcan Malvaceae Malvales

Hibiscus cannabinus

36 2n Chromosomes
Malvaceae Family
Taxonomic Classification
Kingdom Plantae Phylum Magnoliophyta Class Magnoliopsida Order Malvales Family Malvaceae
Genome & Ploidy
2n
36 chromosomes
Polyploidy History (PhyloWGD)
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Species Notes
Description
Kenaf [etymology: Persian], Hibiscus cannabinus, is a plant in the family Malvaceae also called Deccan hemp and Java jute. Hibiscus cannabinus is in the genus Hibiscus and is native to Africa, though its exact origin is unknown. The name also applies to the fibre obtained from this plant. Kenaf is one of the allied fibres of jute and shows similar characteristics.
Data source
build_pgdd_species_jsons.py
Wikipedia
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Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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